Quantitative PCR

This is a template which you can use to help get you started on the wiki submission. It is just intended as a guide and you may modify the structure to suit your project.

Contributors

• Name and what department each person was in.
• Student or staff partner?
• How was each person involved?
• What rough dates did they contribute?
• Jaroslaw Ciba, Department of Physics.
• Thomas Travis, Department of Physics.
• Marcus Essam
• Jacky Zhu
• Anabel Varela Carver, Department of Surgery & Cancer. Staff partner from October 2021.
• Joana Dos Santos, Department of Surgery & Cancer. Staff partner from October 2021.
• Jon Krell, Department of Surgery & Cancer. Staff partner from October 2021.
• Robert Kypta, Department of Surgery & Cancer. Staff partner from October 2021.

Aims & Learning Outcomes

• Explain the motivation for your visualisation.

• Introduce the subject of your visualisation.
• Which module and year is it intended for and which setting (lecture or self study)?
• List learning outcomes. E.g.: "After using this visualisation, students should be able to explain that..."

This visualisations is intended for self-study to support iBSc Cancer Frontiers Module 1 teaching (q-PCR principles, data analysis and application to an experiment involving cancer cells)

Intended Learning Outcome:

After using this visualisation, students should be able to explain how changes in Ct values from a q-PCR experiment relate to changes in the numbers of copies of a gene that a cell contains (for example, a cancer cell upon treatment with a drug).

Design Overview

• What the final outcome was, how it looks, how it functions etc.
• Include graphics.
• Do not include justification or design progression, leave this for later sections.

Design Justification

Assessment Criteria

• List your cohort's assessment criteria. You may want to number the assessment criteria so you can refer to them easily later.

Education Design

• What Methods were considered to convey concepts?
• Design progression, key choices with justifications.
• How has feedback been incorporated.

Graphical Design

• How were accessibility issues considered?
• How was space used effectively?
• Design progression, key choices with justifications.
• How has feedback been incorporated.

• How is the design intuitive?

Interaction Design

• Choice of interactive element(s) that fit in organically with the visualisation [inspiration of choice might be from lecture/in-class activity or other sources] - Sliders/Buttons/Cursor (hover/click).
• Keeping accessibility of interactive elements in mind during design phase.
• Design progression, key choices with justifications.
• How has feedback been incorporated.

Progress and Future Work

• Is the design finalised?
• Which pages have been uploaded to website?
• Any ideas for future improvements.

Links

• Link to GitHub repository for code in development:
• Link to visualisation on ImpVis website (when uploaded):
• Link to Collection on ImpVis website (when created):
• Any other links to resources (Miro boards / notes pages / Google Docs etc):